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from filePath import *
import cmd #cmd in small letters is the name of the module. do cmd.Cmd.any_function() to run a function from the class from the module
import matplotlib.pyplot as plt
import matplotlib as mpl
from mpl_toolkits.mplot3d import Axes3D
import glob
from plotRaman import *
import os
import numpy as np
from material import *
import pyperclip3
########################################
# Nicolas Roisin
#
mpl.rcParams['font.family']='serif'
# cmfont = font_manager.FontProperties(fname=mpl.get_data_path() + '/fonts/ttf/cmr10.ttf')
# mpl.rcParams['font.serif']=cmfont.get_name()
# mpl.rcParams['mathtext.fontset']='cm'
mpl.rcParams['axes.unicode_minus']=False
# mpl.rcParams['lines.marker']="o"
# mpl.rcParams['lines.linestyle']="-"
# mpl.rcParams['lines.markeredgecolor']="k"
# mpl.rcParams['lines.markersize']=3.5
# mpl.rcParams['lines.alpha']=0.5
SMALL_SIZE = 10
MEDIUM_SIZE = 13
BIGGER_SIZE = 15
plt.rcParams["font.family"] = "serif"
plt.rcParams["mathtext.rm"] = "serif"
plt.rcParams["mathtext.it"] = "serif"
plt.rcParams["mathtext.sf"] = "serif"
plt.rcParams["mathtext.fontset"] = "dejavuserif"
plt.rc('font', size=MEDIUM_SIZE) # controls default text sizes
plt.rc('axes', titlesize=MEDIUM_SIZE) # fontsize of the axes title
plt.rc('axes', labelsize=MEDIUM_SIZE) # fontsize of the x and y labels
#plt.rc('font', weight="normal") # fontsize of the x and y labels
plt.rc('xtick', labelsize=MEDIUM_SIZE) # fontsize of the tick labels
plt.rc('ytick', labelsize=MEDIUM_SIZE) # fontsize of the tick labels
plt.rc('legend', fontsize=SMALL_SIZE) # legend fontsize
plt.rc('figure', titlesize=MEDIUM_SIZE) # fontsize of the figure title
#
# Nicolas Roisin
########################################
def plot(plotT,save_dir):
if(plotT!=""):
if(plotT=="select"):
plot_select(save_dir)
elif(plotT=="all"):
plot_all(save_dir)
elif(plotT=="rifle"):
plot_rifle(save_dir)
else:
print("welcome to the generic plot tool of DesCar. This wizard allows you to plot one or more curves on one plot. Avalaible commands include: \n-rifle: plot every file in the folder separatly\n-all: plot all file in the folder on the same plot\n-select: plot a selection of file in the folder on the same plot")
a=input("Do you want to plot a selection of files or all files in folder. ? (rifle/select/all)")
if(a=="select"):
plot_select(save_dir)
elif(a=="all"):
plot_all(save_dir)
elif(a=="rifle"):
plot_rifle(save_dir)
else:
print("Command not recognised. Resuming...")
def plot_rifle(save_dir):
files=glob.glob("*.txt")
if(plotstyle.get_style()==None):
disp=input("\nDisplay type for each curve (separated data points or connected line. Type l, p, f, d, x, lx or lp separated by a coma. Type line, point, fancy, dash, cross, lineCross or linePoint to set a setting for all or Enter to unspecified): ").split(',')
disp[0]=disp[0].lower()
else:
disp=plotstyle.get_style().split()#cheap trick for the code to stay compatible with previous line (legacy)
disp[0]=disp[0].lower()
axes = ["",""]
if(plotstyle.get_x()==None or plotstyle.get_y()==None):
axes=input("What is the name of the X and Y axes (coma separated x,y): ").split(',')
else:
axes=plotstyle.get_x(),plotstyle.get_y()
for i,fp in enumerate(files):
print("currently running on: ",files[i])
fig=plt.figure()
ax=fig.add_subplot()
with open(fp) as file:
x_temp = []
y_temp = []
for line in file:
values = line.split()
x_temp.append(float(values[0]))
y_temp.append(float(values[1]))
sort=np.argsort(x_temp)
x=[]
y=[]
for k in range(len(sort)):
x.append(x_temp[sort[k]])
y.append(y_temp[sort[k]])
try:
if(disp[0]=="point"):
ax.plot(x,y,ls="",marker=".")
elif(disp[0]=="line"):
ax.plot(x,y)
elif(disp[0]=="fancy"):
ax.plot(x,y,ls="-",marker=".",markersize="8",markeredgecolor="k")
elif(disp[0]=="linepoint"):
ax.plot(x,y,ls="-",marker=".")
elif(disp[0]=="dash"):
ax.plot(x,y,ls='--')
elif(disp[0]=="cross"):
ax.plot(x,y,ls='',marker="x")
elif(disp[0]=="linecross"):
ax.plot(x,y,ls='-',marker="x")
else:
if(disp[i].lower()=="l"):
ax.plot(x,y)
elif(disp[i].lower()=="p"):
ax.plot(x,y,ls="",marker=".")
elif(disp[i]=="f"):
ax.plot(x,y,ls="-",marker=".",markersize="8",markeredgecolor="k")
elif(disp[i]=="lp"):
ax.plot(x,y,ls="-",marker=".")
elif(disp[i]=="d"):
ax.plot(x,y,ls='--')
elif(disp[i]=="x"):
ax.plot(x,y,ls='',marker="x")
elif(disp[0]=="lx"):
ax.plot(x,y,ls='-',marker="x")
else:
print("Display style \"",disp[i],"\" not recognised. Printing \"",files[i],"\" with connected lines")
ax.plot(x,y)
except:
print("No style detected for \"",files[i],"\" Printing with connected lines")
ax.plot(x,y)
try:
ax.set_xlabel(axes[0])
ax.set_ylabel(axes[1])
except:
print("No X or Y label provided")
ax.set_xlabel("")
ax.set_ylabel("")
titles=fileExtensionRemover(glob.glob("*.txt"))
ax.set_title(titles[i])
ax.grid()
#plt.legend(files[i])
temp=os.getcwd()
os.chdir(save_dir)
showRamanMaterial(global_material.get_material(),ax)
plt.savefig(titles[i]+".png",format = 'png')
# plt.savefig(titles[i]+".eps",format = 'eps')
plt.clf()
plt.close()
os.chdir(temp)
def plot_select(save_dir):
print("Type the name of a file with or without the .txt or the name of multiple files separated with a coma")
trf=fileExtension((input("What file do you wanna plot today ? ")).split(','))
if(inFolder(trf)!=1):
print("Missing files: Exiting")
else:
if(plotstyle.get_style()==None):
disp=input("\nDisplay type for each curve (separated data points or connected line. Type l, p, f, d, x, lx or lp separated by a coma. Type line, point, fancy, dash, cross, lineCross or linePoint to set a setting for all Enter to unspecified): ").split(',')
disp[0]=disp[0].lower()
else:
disp=plotstyle.get_style().split()#cheap trick for the code to stay compatible with previous line (legacy)
disp[0]=disp[0].lower()
if(plotstyle.get_title()==None):
title=input("What title should we give to the plot ? ")
else:
title=plotstyle.get_title()
axes = ["",""]
if(plotstyle.get_x()==None or plotstyle.get_y()==None):
axes=input("What is the name of the X and Y axes (coma separated x,y): ").split(',')
else:
axes=plotstyle.get_x(),plotstyle.get_y()
fig=plt.figure()
ax=fig.add_subplot()
for i,fp in enumerate(trf):
with open(fp) as file:
x_temp = []
y_temp = []
for line in file:
values = line.split()
x_temp.append(float(values[0]))
y_temp.append(float(values[1]))
sort=np.argsort(x_temp)
x=[]
y=[]
for k in range(len(sort)):
x.append(x_temp[sort[k]])
y.append(y_temp[sort[k]])
try:
if(disp[0]=="point"):
ax.plot(x,y,ls="",marker=".")
elif(disp[0]=="line"):
ax.plot(x,y)
elif(disp[0]=="fancy"):
ax.plot(x,y,ls="-",marker=".",markersize="8",markeredgecolor="k")
elif(disp[0]=="linepoint"):
ax.plot(x,y,ls="-",marker=".")
elif(disp[0]=="dash"):
ax.plot(x,y,ls='--')
elif(disp[0]=="linecross"):
ax.plot(x,y,ls='-',marker="x")
elif(disp[0]=="cross"):
ax.plot(x,y,ls='',marker="x")
else:
if(disp[i].lower()=="l"):
ax.plot(x,y)
elif(disp[i].lower()=="p"):
ax.plot(x,y,ls="",marker=".")
elif(disp[i]=="f"):
ax.plot(x,y,ls="-",marker=".",markersize="8",markeredgecolor="k")
elif(disp[i]=="lp"):
ax.plot(x,y,ls="-",marker=".")
elif(disp[i]=="d"):
ax.plot(x,y,ls='--')
elif(disp[i]=="x"):
ax.plot(x,y,ls='',marker="x")
elif(disp[i]=="lx"):
ax.plot(x,y,ls='-',marker="x")
else:
print("\nDisplay style \"",disp[i],"\" not recognised. Printing \"",trf[i],"\" with connected lines\n")
ax.plot(x,y)
except:
print("\nNo style detected for \"",trf[i],"\" Printing with connected lines\n")
ax.plot(x,y)
try:
ax.set_xlabel(axes[0])
ax.set_ylabel(axes[1])
except:
print("No X or Y label provided")
ax.set_xlabel("")
ax.set_ylabel("")
ax.set_title(title)
ax.grid()
lgd=legend(trf)
if(lgd!=['']):
ax.legend(lgd)
temp=os.getcwd()
os.chdir(save_dir)
showRamanMaterial(global_material.get_material(),ax)
plt.savefig(title+".png",format = 'png')
# plt.savefig(title+".eps",format = 'eps')
plt.show()
plt.clf()
plt.close()
os.chdir(temp)
def plot_all(save_dir):
print("This wizard allows you to plot all the files in the folder.")
files=glob.glob("*.txt")
print("\nRoutine will work in the following order:\n")
for l in range(len(files)):
print(files[l])
if(plotstyle.get_style()==None):
disp=input("\nDisplay type for each curve (separated data points or connected line. Type l, p, f, lp, x, lx or d separated by a coma. Type line, point, fancy, linePoint, cross, lineCross or dash to set a setting for all.\nEntry or Enter to unspecified): ").split(',')
disp[0]=disp[0].lower()
else:
disp=plotstyle.get_style().split()#cheap trick for the code to stay compatible with previous line (legacy)
disp[0]=disp[0].lower()
if(plotstyle.get_title()==None):
title=input("What title should we give to the plot ? ")
else:
title=plotstyle.get_title()
axes = ["",""]
if(plotstyle.get_x()==None or plotstyle.get_y()==None):
axes=input("What is the name of the X and Y axes (coma separated x,y): ").split(',')
else:
axes=plotstyle.get_x(),plotstyle.get_y()
auto_lgd=''
fig=plt.figure()
ax=fig.add_subplot()
for i,fp in enumerate(files): #retourne l'index dans i et retourne le premiere element (T1.txt par exemple) dans fp
print("currently running on: ",files[i])
with open(fp) as file:
auto_lgd=auto_lgd+","+fp
x_temp=[]
y_temp=[]
for line in file:
values = line.split()
x_temp.append(float(values[0]))
y_temp.append(float(values[1]))
sort=np.argsort(x_temp)
x=[]
y=[]
for k in range(len(sort)):
x.append(x_temp[sort[k]])
y.append(y_temp[sort[k]])
try:
if(disp[0]=="point"):
ax.plot(x,y,ls="",marker=".")
elif(disp[0]=="line"):
ax.plot(x,y)
elif(disp[0]=="fancy"):
ax.plot(x,y,ls="-",marker=".",markersize="8",markeredgecolor="k")
elif(disp[0]=="linepoint"):
ax.plot(x,y,ls="-",marker=".")
elif(disp[0]=="dash"):
ax.plot(x,y,ls='--')
elif(disp[0]=="cross"):
ax.plot(x,y,ls='',marker="x")
elif(disp[0]=="linecross"):
ax.plot(x,y,ls='-',marker="x")
else:
if(disp[i].lower()=="l"):
ax.plot(x,y)
elif(disp[i].lower()=="p"):
ax.plot(x,y,ls="",marker=".")
elif(disp[i]=="f"):
ax.plot(x,y,ls="-",marker=".",markersize="8",markeredgecolor="k")
elif(disp[i]=="lp"):
ax.plot(x,y,ls="-",marker=".")
elif(disp[i]=="d"):
ax.plot(x,y,ls='--')
elif(disp[i]=="x"):
ax.plot(x,y,ls='',marker="x")
elif(disp[i]=="lx"):
ax.plot(x,y,ls='-',marker="x")
else:
print("\nDisplay style \"",disp[i],"\" not recognised. Printing \"",files[i],"\" with connected lines\n")
ax.plot(x,y)
except:
print("\nNo style detected for \"",files[i],"\" Printing with connected lines\n")
ax.plot(x,y)
try:
ax.set_xlabel(axes[0])
ax.set_ylabel(axes[1])
except:
print("No X or Y label provided")
ax.set_xlabel("")
ax.set_ylabel("")
ax.set_title(title)
ax.grid()
lgd=legend(auto_lgd.split(",")[1:])
if(lgd!=['']):
ax.legend(lgd)
temp=os.getcwd()
os.chdir(save_dir)
showRamanMaterial(global_material.get_material(),ax)
plt.savefig(title+".png",format = 'png')
# plt.savefig(title+".eps",format = 'eps')
plt.show()
plt.clf()
plt.close()
os.chdir(temp)
class Plot:
def __init__(self):
self.x=None
self.y=None
self.title=None
self.legend=None
self.style=None
self.lgd=None
def set_title(self,title):
self.title=title
def set_x(self,x):
self.x=x
def set_y(self,y):
self.y=y
def set_style(self,style):
self.style=style
def clear(self):
self.x=None
self.y=None
self.title=None
self.legend=None
self.style=None
self.lgd=None
def get_style(self):
return self.style
def get_x(self):
return self.x
def get_y(self):
return self.y
def get_title(self):
return self.title
# def set_lgd(self,lgd):
# self.lgd=lgd
plotstyle=Plot()
def write_plot_config(plot_config,descar_path):
with open(descar_path+"\\plot_config.txt",w) as file:
file.write(plot_config)
# def plot_lgd(lgd):
# if(lgd==""):
# a=input("\nWhat general lgd do you want to use: ")
# if(a.lower()=="fancy" or a.lower()=="linepoint" or a.lower()=="line" or a.lower()=="point"):
# plotstyle.set_lgd(a)
# print("\nGeneral lgd set to: ",a,"\n")
# else:
# print("\nlgd not supported by plot general settings. Exiting ...")
# else:
# if(lgd.lower()=="fancy" or lgd.lower()=="linepoint" or lgd.lower()=="line" or lgd.lower()=="point"):
# plotstyle.set_lgd(lgd)
# print("\nGeneral lgd set to: ",lgd,"\n")
# else:
# print("\nlgd not supported by plot general settings. Exiting ...")
def plot_style(style,descar_path):
if(style==""):
a=input("\nWhat general style do you want to use: ")
if(a.lower()=="fancy" or a.lower()=="linepoint" or a.lower()=="line" or a.lower()=="point" or a.lower()=="dash" or a.lower()=="cross" or a.lower()=="linecross"):
plotstyle.set_style(a)
plot_config=np.genfromtxt(descar_path+"\\plot_config.txt",delimiter=',',dtype='str')
style=a.lower()
title=plot_config[1]
x=plot_config[2]
y=plot_config[3]
with open(descar_path+"\\plot_config.txt",'w') as file:
file.write(style+','+title+','+x+','+y)
print("\nGeneral style set to: ",a,"\n")
else:
print("\nStyle not supported by plot general settings. Exiting ...")
else:
if(style.lower()=="fancy" or style.lower()=="linepoint" or style.lower()=="line" or style.lower()=="point" or style.lower()=="dash" or style.lower()=="cross" or style.lower()=="linecross"):
plotstyle.set_style(style)
plot_config=np.genfromtxt(descar_path+"\\plot_config.txt",delimiter=',',dtype='str')
style=style.lower()
title=plot_config[1]
x=plot_config[2]
y=plot_config[3]
with open(descar_path+"\\plot_config.txt",'w') as file:
file.write(style+','+title+','+x+','+y)
print("\nGeneral style set to: ",style,"\n")
else:
print("\nStyle not supported by plot general settings. Exiting ...")
def plot_x(x,descar_path):
if(x==""):
a=input("\nWhat general x axis text do you want to use: ")
plotstyle.set_x(a)
print("x axis text set to: ",a,"\n")
plot_config=np.genfromtxt(descar_path+"\\plot_config.txt",delimiter=',',dtype='str')
style=plot_config[0]
title=plot_config[1]
x=a
y=plot_config[3]
with open(descar_path+"\\plot_config.txt",'w') as file:
file.write(style+','+title+','+x+','+y)
else:
plotstyle.set_x(x)
print("x axis text set to: ",x,"\n")
plot_config=np.genfromtxt(descar_path+"\\plot_config.txt",delimiter=',',dtype='str')
style=plot_config[0]
title=plot_config[1]
x=x
y=plot_config[3]
with open(descar_path+"\\plot_config.txt",'w') as file:
file.write(style+','+title+','+x+','+y)
def plot_y(y,descar_path):
if(y==""):
a=input("\nWhat general y axis text do you want to use: ")
plotstyle.set_y(a)
print("y axis text set to: ",a,"\n")
plot_config=np.genfromtxt(descar_path+"\\plot_config.txt",delimiter=',',dtype='str')
style=plot_config[0]
title=plot_config[1]
x=plot_config[2]
y=a
with open(descar_path+"\\plot_config.txt",'w') as file:
file.write(style+','+title+','+x+','+y)
else:
plotstyle.set_y(y)
print("y axis text set to: ",y,"\n")
plot_config=np.genfromtxt(descar_path+"\\plot_config.txt",delimiter=',',dtype='str')
style=plot_config[0]
title=plot_config[1]
x=plot_config[2]
y=y
with open(descar_path+"\\plot_config.txt",'w') as file:
file.write(style+','+title+','+x+','+y)
def plot_title(title,descar_path):
if(title==""):
a=input("\nWhat title do you want to give to all the upcoming plots: ")
plotstyle.set_title(a)
print("Title set to: ",a)
plot_config=np.genfromtxt(descar_path+"\\plot_config.txt",delimiter=',',dtype='str')
style=plot_config[0]
title=a
x=plot_config[2]
y=plot_config[3]
with open(descar_path+"\\plot_config.txt",'w') as file:
file.write(style+','+title+','+x+','+y)
else:
plotstyle.set_title(title)
print("Title set to: ",title,"\n")
plot_config=np.genfromtxt(descar_path+"\\plot_config.txt",delimiter=',',dtype='str')
style=plot_config[0]
title=title
x=plot_config[2]
y=plot_config[3]
with open(descar_path+"\\plot_config.txt",'w') as file:
file.write(style+','+title+','+x+','+y)
def plot_clear(descar_path):
plotstyle.clear()
print("\nGeneral plot style cleared succesfully !\n")
plot_config=np.genfromtxt(descar_path+"\\plot_config.txt",delimiter=',',dtype='str')
style=''
title=''
x=''
y=''
with open(descar_path+"\\plot_config.txt",'w') as file:
file.write(style+','+title+','+x+','+y)