added dependencies and fixed the no-shell escape

Makefile

@@ -5,9 +5,8 @@ PHY1303.pdf : PHY1303.tex bratu.pdf heat_0.pdf \
 	radio.pdf error.pdf heat_3d.pdf  \
 	error_withRK4.pdf \
 	bvp_prob1.pdf bvp_prob2.pdf bvp_error.pdf \
-	rounding_error.pdf upwind.pdf downwind.pdf compare_up_lax.pdf \
-	PHY1303.f0.table PHY1303.f1.table PHY1303.f2.table
-	pdflatex PHY1303.tex
+	rounding_error.pdf upwind.pdf downwind.pdf compare_up_lax.pdf 
+	latexmk -e '$$pdflatex=q/pdflatex %O -shell-escape %S/' -pdf
 
 pdf : PHY1303.tex
 	pdflatex PHY1303.tex
@@ -72,16 +71,16 @@ downwind.pdf : advect.py
 compare_up_lax.pdf : advect.py
 	python advect.py
 
-PHY1303.f2.table : PHY1303.f2.gnuplot
-	gnuplot PHY1303.f2.gnuplot
-
-
-PHY1303.f0.table : PHY1303.f0.gnuplot
-	gnuplot PHY1303.f0.gnuplot
-
-
-PHY1303.f1.table : PHY1303.f1.gnuplot
-	gnuplot PHY1303.f1.gnuplot
+# PHY1303.f2.table : PHY1303.f2.gnuplot
+# 	gnuplot PHY1303.f2.gnuplot
+# 
+# 
+# PHY1303.f0.table : PHY1303.f0.gnuplot
+# 	gnuplot PHY1303.f0.gnuplot
+# 
+# 
+# PHY1303.f1.table : PHY1303.f1.gnuplot
+# 	gnuplot PHY1303.f1.gnuplot
 
 
 make clean: 

PHY1303.tex

+%& -shell-escape
+
 %$Header$
 % modification history
 % Mon Sep 30 13:10:10 CEST 2013 : 

README.md

@@ -2,4 +2,8 @@
 
 Lecture notes for course LPHYS1303
 
-test
+Dependencies for compiling: 
+
+latekmk
+tikzpackage
+gnuplot